Recent Publications

• 1. Chen Z
  2. Padmanabhan K
  Adult-neurogenesis allows for representational stability and flexibility in early olfactory system.; bioRxiv : the preprint server for biology. 2024 Jul 04.
• 1. Sandoval SO
  2. Cappuccio G
  3. Kruth K
  4. Osenberg S
  5. Khalil SM
  6. Méndez-Albelo NM
  7. Padmanabhan K
  8. Wang D
  9. Niciu MJ
  10. Bhattacharyya A
  11. Stein JL
  12. Sousa AMM
  13. Waxman EA
  14. Buttermore ED
  15. Whye D
  16. Sirois CL
  17. Williams A
  18. Maletic-Savatic M
  19. Zhao X
  Rigor and reproducibility in human brain organoid research: Where we are and where we need to go.; Stem cell reports. 2024 May 10.
• 1. Chockanathan U
  2. Padmanabhan K
  Differential disruptions in population coding along the dorsal-ventral axis of CA1 in the APP/PS1 mouse model of Aβ pathology.; PLoS computational biology; Vol 20(5), pp. e1012085. 2024 May 06.
• 1. Pasini FW
  2. Busch AN
  3. Mináč J
  4. Padmanabhan K
  5. Muller L
  Algebraic approach to spike-time neural codes in the hippocampus.; Physical review. E; Vol 108(5-1), pp. 054404. 2023 Nov.
• 1. Feng G
  2. Joseph A
  3. Dholakia K
  4. Shang F
  5. Pfeifer CW
  6. Power D
  7. Padmanabhan K
  8. Schallek J
  High-resolution structural and functional retinal imaging in the awake behaving mouse.; Communications biology; Vol 6(1), pp. 572. 2023 May 29.
• 1. Uzun YS
  2. Santos R
  3. Marchetto MC
  4. Padmanabhan K
  Network size affects the complexity of activity in human iPSC-derived neuronal populations.; bioRxiv : the preprint server for biology. 2023 Jan 02.
• 1. Villanueva DM
  2. Taunk P
  3. Krishnan P
  4. Figueroa N
  Emerging Multiorgan Klebsiella pneumoniae Invasive Syndrome Leading to Septic Shock: A Case Report and Review of the Literature.; Cureus; Vol 14(7), pp. e26647. 2022 Jul 07.
• 1. Chen Z
  2. Padmanabhan K
  Top-down feedback enables flexible coding strategies in the olfactory cortex.; Cell reports; Vol 38(12). 2022 Mar 22.
• 1. Chockanthan U
  2. Padmanabhan K
  From synapses to circuits and back: bridging levels of understanding in animal models of Alzheimer disease.; The European journal of neuroscience. 2022 Mar 04.
• 1. Chockanathan U
  2. Padmanabhan K
  Divergence in Population Coding for Space between Dorsal and Ventral CA1.; eNeuro. 2021 Aug 25.
• 1. Chockanathan U
  2. Crosier EJW
  3. Waddle S
  4. Lyman E
  5. Gerkin RC
  6. Padmanabhan K
  Changes in pair-wise correlations during running reshapes global network state in the main olfactory bulb.; Journal of neurophysiology. 2021 Mar 03.
• 1. Chockanathan U
  2. Warner EJ
  3. Turpin L
  4. O'Banion MK
  5. Padmanabhan K
  Altered dorsal CA1 neuronal population coding in the APP/PS1 mouse model of Alzheimer's disease.; Scientific reports; Vol 10(1). 2020 Jan 23.
• 1. Chen Z
  2. Padmanabhan K
  Top-Down Control of Inhibitory Granule Cells in the Main Olfactory Bulb Reshapes Neural Dynamics Giving Rise to a Diversity of Computations.; Frontiers in computational neuroscience; Vol 14. 2020.
• 1. Warner EJ
  2. Padmanabhan K
  Sex Differences in Head-fixed Voluntary Running Behavior in C57BL/6J mice.; The European journal of neuroscience. 2019 Dec 18.
• 1. Marchetto MC
  2. Hrvoj-Mihic B
  3. Kerman BE
  4. Yu DX
  5. Vadodaria KC
  6. Linker SB
  7. Narvaiza I
  8. Santos R
  9. Denli AM
  10. Mendes AP
  11. Oefner R
  12. Cook J
  13. McHenry L
  14. Grasmick JM
  15. Heard K
  16. Fredlender C
  17. Randolph-Moore L
  18. Kshirsagar R
  19. Xenitopoulos R
  20. Chou G
  21. Hah N
  22. Muotri AR
  23. Padmanabhan K
  24. Semendeferi K
  25. Gage FH
  Species-specific maturation profiles of human, chimpanzee and bonobo neural cells.; eLife; Vol 8. 2019 Feb 07.
• 1. Sarkar A
  2. Mei A
  3. Paquola ACM
  4. Stern S
  5. Bardy C
  6. Klug JR
  7. Kim S
  8. Neshat N
  9. Kim HJ
  10. Ku M
  11. Shokhirev MN
  12. Adamowicz DH
  13. Marchetto MC
  14. Jappelli R
  15. Erwin JA
  16. Padmanabhan K
  17. Shtrahman M
  18. Jin X
  19. Gage FH
  Efficient Generation of CA3 Neurons from Human Pluripotent Stem Cells Enables Modeling of Hippocampal Connectivity In Vitro.; Cell stem cell; Vol 22(5). 2018 May 03.
• 1. Padmanabhan K
  2. Osakada F
  3. Tarabrina A
  4. Kizer E
  5. Callaway EM
  6. Gage FH
  7. Sejnowski TJ
  Centrifugal Inputs to the Main Olfactory Bulb Revealed Through Whole Brain Circuit-Mapping.; Frontiers in neuroanatomy; Vol 12. 2018.
• 1. Marchetto MC
  2. Belinson H
  3. Tian Y
  4. Freitas BC
  5. Fu C
  6. Vadodaria K
  7. Beltrao-Braga P
  8. Trujillo CA
  9. Mendes APD
  10. Padmanabhan K
  11. Nunez Y
  12. Ou J
  13. Ghosh H
  14. Wright R
  15. Brennand K
  16. Pierce K
  17. Eichenfield L
  18. Pramparo T
  19. Eyler L
  20. Barnes CC
  21. Courchesne E
  22. Geschwind DH
  23. Gage FH
  24. Wynshaw-Boris A
  25. Muotri AR
  Altered proliferation and networks in neural cells derived from idiopathic autistic individuals.; Molecular psychiatry; Vol 22(6). 2017 Jun.
• 1. Padmanabhan K
  2. Osakada F
  3. Tarabrina A
  4. Kizer E
  5. Callaway EM
  6. Gage FH
  7. Sejnowski TJ
  Diverse Representations of Olfactory Information in Centrifugal Feedback Projections.; The Journal of neuroscience : the official journal of the Society for Neuroscience; Vol 36(28). 2016 Jul 13.
• 1. Wang W
  2. Tripathy SJ
  3. Padmanabhan K
  4. Urban NN
  5. Kass RE
  An Empirical Model for Reliable Spiking Activity.; Neural computation; Vol 27(8). 2015 Aug.
• 1. Padmanabhan K
  2. Urban NN
  Disrupting information coding via block of 4-AP-sensitive potassium channels.; Journal of neurophysiology; Vol 112(5). 2014 Sep 1.
• 1. Tripathy SJ
  2. Padmanabhan K
  3. Gerkin RC
  4. Urban NN
  Intermediate intrinsic diversity enhances neural population coding.; Proceedings of the National Academy of Sciences of the United States of America; Vol 110(20). 2013 May 14.
• 1. Padmanabhan K
  2. Eddy WF
  3. Crowley JC
  A novel algorithm for optimal image thresholding of biological data.; Journal of neuroscience methods; Vol 193(2). 2010 Nov 30.
• 1. Padmanabhan K
  2. Andrews SE
  3. Fitzpatrick JA
  Multi-photon imaging.; Current protocols in cytometry / editorial board, J. Paul Robinson, managing editor ... [et al.]; Vol Chapter 2. 2010 Oct.
• 1. Padmanabhan K
  2. Urban NN
  Intrinsic biophysical diversity decorrelates neuronal firing while increasing information content.; Nature neuroscience; Vol 13(10). 2010 Oct.
• 1. Hovis KR
  2. Padmanabhan K
  3. Urban NN
  A simple method of in vitro electroporation allows visualization, recording, and calcium imaging of local neuronal circuits.; Journal of neuroscience methods; Vol 191(1). 2010 Aug 15.
• 1. Gräub R
  2. Lancero H
  3. Pedersen A
  4. Chu M
  5. Padmanabhan K
  6. Xu XQ
  7. Spitz P
  8. Chalkley R
  9. Burlingame AL
  10. Stokoe D
  11. Bernstein HS
  Cell cycle-dependent phosphorylation of human CDC5 regulates RNA processing.; Cell cycle (Georgetown, Tex.); Vol 7(12). 2008 Jun 15.
• 1. Hlaing M
  2. Spitz P
  3. Padmanabhan K
  4. Cabezas B
  5. Barker CS
  6. Bernstein HS
  E2F-1 regulates the expression of a subset of target genes during skeletal myoblast hypertrophy.; The Journal of biological chemistry; Vol 279(42). 2004 Oct 15.