Recent Publications

• 1. Cosler LE
  2. Midence L
  3. Hayes JJ
  4. Gondeck JT
  5. Moy K
  6. Chen MH
  7. Hogan JD
  The Influence of State Restrictions on Opioid Prescribing: 2006-2018.; Journal of public health management and practice : JPHMP. 2024 Sep 24.
• 1. Kanti Das S
  2. Kumar A
  3. Hao F
  4. Cutter DiPiazza AR
  5. Fang H
  6. Lee TH
  7. Hayes JJ
  Histone H3 tail modifications alter structure and dynamics of the H1 C-terminal domain within nucleosomes.; Journal of molecular biology. 2023 Aug 22.
• 1. Das SK
  2. Kumar A
  3. Hao F
  4. DiPiazza ARC
  5. Lee TH
  6. Hayes JJ
  Histone H3 tail modifications regulate structure and dynamics of the H1 C-terminal domain within nucleosomes.; bioRxiv : the preprint server for biology. 2023 May 12.
• 1. Kumar A
  2. Maurya P
  3. Hayes JJ
  Post-Translation Modifications and Mutations of Human Linker Histone Subtypes: Their Manifestation in Disease.; International journal of molecular sciences; Vol 24(2). 2023 Jan 11.
• 1. Bhat JA
  2. Balliano AJ
  3. Hayes JJ
  Histone protein surface accessibility dictates direction of RSC-dependent nucleosome mobilization.; Nucleic acids research. 2022 Sep 26.
• 1. Hao F
  2. Mishra L
  3. Jaya P
  4. Jones R
  5. Hayes JJ
  Identification and analysis of six phosphorylation sites within the Xenopus laevis H1.0 C-terminal domain indicate distinct effects on nucleosome structure.; Molecular & cellular proteomics : MCP. 2022 May 23.
• 1. Marr LT
  2. Jaya P
  3. Mishra LN
  4. Hayes JJ
  Whole-genome methods to define DNA and histone accessibility and long-range interactions in chromatin.; Biochemical Society transactions. 2022 Feb 15.
• 1. Husain F
  2. Yadav A
  3. Sah SK
  4. Hayes JJ
  5. Rustchenko E
  Candida albicans Strains Adapted to Caspofungin Due to Aneuploidy Become Highly Tolerant under Continued Drug Pressure.; Microorganisms; Vol 11(1). 2022 Jan 21.
• 1. Sah SK
  2. Bhattacharya S
  3. Yadav A
  4. Husain F
  5. Ndiaye ABKT
  6. Kruppa MD
  7. Hayes JJ
  8. Rustchenko E
  Multiple Genes of Candida albicans Influencing Echinocandin Susceptibility in Caspofungin-Adapted Mutants.; Antimicrobial agents and chemotherapy. 2022 Jan 10.
• 1. Poulet A
  2. Mishra LN
  3. Téletchéa S
  4. Hayes JJ
  5. Jacob Y
  6. Thiriet C
  7. Duc C
  Identification and characterization of histones in Physarum polycephalum evidence a phylogenetic vicinity of Mycetozoans to the animal kingdom.; NAR genomics and bioinformatics; Vol 3(4). 2021 Dec.
• 1. Hao F
  2. Kale S
  3. Dimitrov S
  4. Hayes JJ
  Unraveling linker histone interactions in nucleosomes.; Current opinion in structural biology; Vol 71. 2021 Jul 08.
• 1. Sah SK
  2. Hayes JJ
  3. Rustchenko E
  The role of aneuploidy in the emergence of echinocandin resistance in human fungal pathogen Candida albicans.; PLoS pathogens; Vol 17(5). 2021 May.
• 1. Marr LT
  2. Ocampo J
  3. Clark DJ
  4. Hayes JJ
  Global histone protein surface accessibility in yeast indicates a uniformly loosely packed genome with canonical nucleosomes.; Epigenetics & chromatin; Vol 14(1). 2021 Jan 11.
• 1. Hao F
  2. Murphy KJ
  3. Kujirai T
  4. Kamo N
  5. Kato J
  6. Koyama M
  7. Okamato A
  8. Hayashi G
  9. Kurumizaka H
  10. Hayes JJ
  Acetylation-modulated communication between the H3 N-terminal tail domain and the intrinsically disordered H1 C-terminal domain.; Nucleic acids research. 2020 Oct 30.
• 1. Jalil SA
  2. Akram M
  3. Bhat JA
  4. Hayes JJ
  5. Singh SC
  6. ElKabbash M
  7. Guo C
  Creating superhydrophobic and antibacterial surfaces on gold by femtosecond laser pulses.; Applied surface science; Vol 506. 2020 Mar 15.
• 1. Marr L
  2. Clark DJ
  3. Hayes JJ
  A method for assessing histone surface accessibility genome-wide.; Methods (San Diego, Calif.). 2019 Dec 09.
• 1. Tucker C
  2. Bhattacharya S
  3. Wakabayashi H
  4. Bellaousov S
  5. Kravets A
  6. Welle SL
  7. Myers J
  8. Hayes JJ
  9. Bulger M
  10. Rustchenko E
  Author Correction: Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants.; Scientific reports; Vol 9(1). 2019 Jul 05.
• 1. Mishra LN
  2. Hayes JJ
  A nucleosome-free region locally abrogates histone H1-dependent restriction of linker DNA accessibility in chromatin.; The Journal of biological chemistry; Vol 293(50). 2018 Dec 14.
• 1. Tucker C
  2. Bhattacharya S
  3. Wakabayashi H
  4. Bellaousov S
  5. Kravets A
  6. Welle SL
  7. Myers J
  8. Hayes JJ
  9. Bulger M
  10. Rustchenko E
  Transcriptional Regulation on Aneuploid Chromosomes in Divers Candida albicans Mutants.; Scientific reports; Vol 8(1). 2018 Jan 26.
• 1. Gatchalian J
  2. Wang X
  3. Ikebe J
  4. Cox KL
  5. Tencer AH
  6. Zhang Y
  7. Burge NL
  8. Di L
  9. Gibson MD
  10. Musselman CA
  11. Poirier MG
  12. Kono H
  13. Hayes JJ
  14. Kutateladze TG
  Accessibility of the histone H3 tail in the nucleosome for binding of paired readers.; Nature communications; Vol 8(1). 2017 Nov 14.
• 1. Wakabayashi H
  2. Tucker C
  3. Bethlendy G
  4. Kravets A
  5. Welle SL
  6. Bulger M
  7. Hayes JJ
  8. Rustchenko E
  Correction to: NuA4 histone acetyltransferase activity is required for H4 acetylation on a dosage-compensated monosomic chromosome that confers resistance to fungal toxins.; Epigenetics & chromatin; Vol 10(1). 2017 Nov 07.
• 1. Wakabayashi H
  2. Tucker C
  3. Bethlendy G
  4. Kravets A
  5. Welle SL
  6. Bulger M
  7. Hayes J
  8. Rustchenko E
  NuA4 histone acetyltransferase activity is required for H4 acetylation on a dosage-compensated monosomic chromosome that confers resistance to fungal toxins.; Epigenetics & chromatin; Vol 10(1). 2017 Oct 23.
• 1. Tencer AH
  2. Cox KL
  3. Di L
  4. Bridgers JB
  5. Lyu J
  6. Wang X
  7. Sims JK
  8. Weaver TM
  9. Allen HF
  10. Zhang Y
  11. Gatchalian J
  12. Darcy MA
  13. Gibson MD
  14. Ikebe J
  15. Li W
  16. Wade PA
  17. Hayes JJ
  18. Strahl BD
  19. Kono H
  20. Poirier MG
  21. Musselman CA
  22. Kutateladze TG
  Covalent Modifications of Histone H3K9 Promote Binding of CHD3.; Cell reports; Vol 21(2). 2017 Oct 10.
• 1. Murphy KJ
  2. Cutter AR
  3. Fang H
  4. Postnikov YV
  5. Bustin M
  6. Hayes JJ
  HMGN1 and 2 remodel core and linker histone tail domains within chromatin.; Nucleic acids research; Vol 45(17). 2017 Sep 29.
• 1. Bednar J
  2. Garcia-Saez I
  3. Boopathi R
  4. Cutter AR
  5. Papai G
  6. Reymer A
  7. Syed SH
  8. Lone IN
  9. Tonchev O
  10. Crucifix C
  11. Menoni H
  12. Papin C
  13. Skoufias DA
  14. Kurumizaka H
  15. Lavery R
  16. Hamiche A
  17. Hayes JJ
  18. Schultz P
  19. Angelov D
  20. Petosa C
  21. Dimitrov S
  Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.; Molecular cell; Vol 66(5). 2017 Jun 01.
• 1. Bednar J
  2. Garcia-Saez I
  3. Boopathi R
  4. Cutter AR
  5. Papai G
  6. Reymer A
  7. Syed SH
  8. Lone IN
  9. Tonchev O
  10. Crucifix C
  11. Menoni H
  12. Papin C
  13. Skoufias DA
  14. Kurumizaka H
  15. Lavery R
  16. Hamiche A
  17. Hayes JJ
  18. Schultz P
  19. Angelov D
  20. Petosa C
  21. Dimitrov S
  Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.; Molecular cell; Vol 66(3). 2017 May 04.
• 1. Cutter AR
  2. Hayes JJ
  Linker histones: novel insights into structure-specific recognition of the nucleosome.; Biochemistry and cell biology = Biochimie et biologie cellulaire; Vol 95(2). 2017 Apr.
• 1. Balliano A
  2. Hao F
  3. Njeri C
  4. Balakrishnan L
  5. Hayes JJ
  HMGB1 Stimulates Activity of Polymerase β on Nucleosome Substrates.; Biochemistry. 2017 Jan 18.
• 1. Fang H
  2. Wei S
  3. Lee TH
  4. Hayes JJ
  Chromatin structure-dependent conformations of the H1 CTD.; Nucleic acids research; Vol 44(19). 2016 Nov 02.
• 1. Mishra LN
  2. Pepenella S
  3. Rogge R
  4. Hansen JC
  5. Hayes JJ
  Acetylation Mimics Within a Single Nucleosome Alter Local DNA Accessibility In Compacted Nucleosome Arrays.; Scientific reports; Vol 6. 2016 Oct 06.
• 1. Black PJ
  2. Miller AS
  3. Hayes JJ
  Radioresistance of GGG sequences to prompt strand break formation from direct-type radiation damage.; Radiation and environmental biophysics. 2016 Jun 27.
• 1. Yue H
  2. Fang H
  3. Wei S
  4. Hayes JJ
  5. Lee TH
  Single-Molecule Studies of the Linker Histone H1 Binding to DNA and the Nucleosome.; Biochemistry; Vol 55(14). 2016 Apr 12.
• 1. Balliano AJ
  2. Hayes JJ
  Base excision repair in chromatin: Insights from reconstituted systems.; DNA repair; Vol 36. 2015 Dec.
• 1. Cutter AR
  2. Hayes JJ
  A brief review of nucleosome structure.; FEBS letters; Vol 589(20 Pt A). 2015 Oct 7.
• 1. Pepenella S
  2. Murphy KJ
  3. Hayes JJ
  A distinct switch in interactions of the histone H4 tail domain upon salt-dependent folding of nucleosome arrays.; The Journal of biological chemistry; Vol 289(39). 2014 Sep 26.
• 1. Pepenella S
  2. Murphy KJ
  3. Hayes JJ
  Intra- and inter-nucleosome interactions of the core histone tail domains in higher-order chromatin structure.; Chromosoma; Vol 123(1-2). 2014 Mar.
• 1. Raghuram N
  2. Strickfaden H
  3. McDonald D
  4. Williams K
  5. Fang H
  6. Mizzen C
  7. Hayes JJ
  8. Th'ng J
  9. Hendzel MJ
  Pin1 promotes histone H1 dephosphorylation and stabilizes its binding to chromatin.; The Journal of cell biology; Vol 203(1). 2013 Oct 14.
• 1. Elliott GO
  2. Murphy KJ
  3. Hayes JJ
  4. Thiriet C
  Replication-independent nucleosome exchange is enhanced by local and specific acetylation of histone H4.; Nucleic acids research; Vol 41(4). 2013 Feb 1.
• 1. Fang H
  2. Clark DJ
  3. Hayes JJ
  DNA and nucleosomes direct distinct folding of a linker histone H1 C-terminal domain.; Nucleic acids research; Vol 40(4). 2012 Feb.
• 1. Liu N
  2. Hayes JJ
  Preparation of nucleosomes containing a specific H2A-H2A cross-link forming a DNA-constraining loop structure.; Methods in molecular biology (Clifton, N.J.); Vol 833. 2012.
• 1. Yang Z
  2. Hayes JJ
  The divalent cations Ca2+ and Mg2+ play specific roles in stabilizing histone-DNA interactions within nucleosomes that are partially redundant with the core histone tail domains.; Biochemistry; Vol 50(46). 2011 Nov 22.
• 1. Meyer S
  2. Becker NB
  3. Syed SH
  4. Goutte-Gattat D
  5. Shukla MS
  6. Hayes JJ
  7. Angelov D
  8. Bednar J
  9. Dimitrov S
  10. Everaers R
  From crystal and NMR structures, footprints and cryo-electron-micrographs to large and soft structures: nanoscale modeling of the nucleosomal stem.; Nucleic acids research; Vol 39(21). 2011 Nov.
• 1. Liu N
  2. Peterson CL
  3. Hayes JJ
  SWI/SNF- and RSC-catalyzed nucleosome mobilization requires internal DNA loop translocation within nucleosomes.; Molecular and cellular biology; Vol 31(20). 2011 Oct.
• 1. Almouzni G
  2. Hayes JJ
  International symposium on the physicochemical field for genetic activities. Awaji Island, Japan, January 24–26, 2011.; Nucleus (Austin, Tex.); Vol 2(4). 2011 Jul.
• 1. Caterino TL
  2. Fang H
  3. Hayes JJ
  Nucleosome linker DNA contacts and induces specific folding of the intrinsically disordered H1 carboxyl-terminal domain.; Molecular and cellular biology; Vol 31(11). 2011 Jun.
• 1. Jagannathan I
  2. Pepenella S
  3. Hayes JJ
  Activity of FEN1 endonuclease on nucleosome substrates is dependent upon DNA sequence but not flap orientation.; The Journal of biological chemistry; Vol 286(20). 2011 May 20.
• 1. Shukla MS
  2. Syed SH
  3. Goutte-Gattat D
  4. Richard JL
  5. Montel F
  6. Hamiche A
  7. Travers A
  8. Faivre-Moskalenko C
  9. Bednar J
  10. Hayes JJ
  11. Angelov D
  12. Dimitrov S
  The docking domain of histone H2A is required for H1 binding and RSC-mediated nucleosome remodeling.; Nucleic acids research; Vol 39(7). 2011 Apr.
• 1. Caterino TL
  2. Hayes JJ
  Structure of the H1 C-terminal domain and function in chromatin condensation.; Biochemistry and cell biology = Biochimie et biologie cellulaire; Vol 89(1). 2011 Feb.
• 1. Liu N
  2. Balliano A
  3. Hayes JJ
  Mechanism(s) of SWI/SNF-induced nucleosome mobilization.; Chembiochem : a European journal of chemical biology; Vol 12(2). 2011 Jan 24.
• 1. Liu N
  2. Hayes JJ
  When push comes to shove: SWI/SNF uses a nucleosome to get rid of a nucleosome.; Molecular cell; Vol 38(4). 2010 May 28.