Publications

• 1. Huang CZ
  2. Ching-Roa VD
  3. Heckman CM
  4. Sipprell WH
  5. Ibrahim SF
  6. Smoller BR
  7. Giacomelli MG
  Piston-based specimen holder for rapid surgical and biopsy specimen imaging.; Biomedical optics express; Vol 15(5), pp. 2898-2909. 2024 Apr 08.
• 1. Ching-Roa VD
  2. Huang CZ
  3. Giacomelli MG
  Suppression of Subpixel Jitter in Resonant Scanning Systems With Phase-locked Sampling.; IEEE transactions on medical imaging; Vol PP. 2024 Jan 24.
• 1. Huang CZ
  2. Montague JE
  3. Ching-Roa VD
  4. Drage MG
  5. Ibrahim SF
  6. Giacomelli MG
  Rapid clearing and imaging of Mohs and melanoma surgical margins using a low-cost tissue processor.; Biomedical optics express; Vol 15(2), pp. 700-714. 2024 Jan 08.
• 1. Majeski JB
  2. Ching-Roa VD
  3. Giacomelli MG
  4. Choe R
  Design for a low-cost heterodyne frequency domain-diffuse optical spectroscopy system.; Biomedical optics express; Vol 14(6), pp. 2873-2888. 2023 May 24.
• 1. Giacomelli MG
  Optimal real-time resonant scanner linearization using filtered Hermite interpolation.; Biomedical optics express; Vol 14(11), pp. 5861-5869. 2023 Jan 19.
• 1. Ching-Roa VD
  2. Huang CZ
  3. Ibrahim SF
  4. Smoller BR
  5. Giacomelli MG
  Real-time Analysis of Skin Biopsy Specimens With 2-Photon Fluorescence Microscopy.; JAMA dermatology. 2022 Sep 07.
• 1. Huang C
  2. Ching-Roa V
  3. Liu Y
  4. Giacomelli MG
  High-speed mosaic imaging using scanner-synchronized stage position sampling.; Journal of biomedical optics; Vol 27(1). 2022 Jan.
• 1. Ching-Roa VD
  2. Huang CZ
  3. Giacomelli MG
  Improved microscopy with ultraviolet surface excitation (MUSE) using high-index immersion illumination.; Biomedical optics express; Vol 12(10). 2021 Oct 01.
• 1. Ching-Roa VD
  2. Olson EM
  3. Ibrahim SF
  4. Torres R
  5. Giacomelli MG
  Publisher Correction: Ultrahigh-speed point scanning two-photon microscopy using high dynamic range silicon photomultipliers.; Scientific reports; Vol 11(1). 2021 Apr 13.
• 1. Ching-Roa VD
  2. Olson EM
  3. Ibrahim SF
  4. Torres R
  5. Giacomelli MG
  Ultrahigh-speed point scanning two-photon microscopy using high dynamic range silicon photomultipliers.; Scientific reports; Vol 11(1). 2021 Mar 04.
• 1. Cahill LC
  2. Wu Y
  3. Yoshitake T
  4. Ponchiardi C
  5. Giacomelli MG
  6. Wagner AA
  7. Rosen S
  8. Fujimoto JG
  Nonlinear microscopy for detection of prostate cancer: analysis of sensitivity and specificity in radical prostatectomies.; Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc; Vol 33(5). 2020 May.
• 1. Giacomelli MG
  2. Faulkner-Jones BE
  3. Cahill LC
  4. Yoshitake T
  5. Do D
  6. Fujimoto JG
  Comparison of nonlinear microscopy and frozen section histology for imaging of Mohs surgical margins.; Biomedical optics express; Vol 10(8). 2019 Aug 01.
• 1. Ahsen OO
  2. Liang K
  3. Lee HC
  4. Giacomelli MG
  5. Wang Z
  6. Potsaid B
  7. Figueiredo M
  8. Huang Q
  9. Jayaraman V
  10. Fujimoto JG
  11. Mashimo H
  Assessment of Barrett's esophagus and dysplasia with ultrahigh-speed volumetric en face and cross-sectional optical coherence tomography.; Endoscopy; Vol 51(4). 2019 Apr.
• 1. Cahill LC
  2. Fujimoto JG
  3. Giacomelli MG
  4. Yoshitake T
  5. Wu Y
  6. Lin DI
  7. Ye H
  8. Carrasco-Zevallos OM
  9. Wagner AA
  10. Rosen S
  Comparing histologic evaluation of prostate tissue using nonlinear microscopy and paraffin H&E: a pilot study.; Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc. 2019 Mar 26.
• 1. Giacomelli MG
  Evaluation of silicon photomultipliers for multiphoton and laser scanning microscopy.; Journal of biomedical optics; Vol 24(10). 2019 Jan.
• 1. Giacomelli MG
  2. Yoshitake T
  3. Cahill LC
  4. Vardeh H
  5. Quintana LM
  6. Faulkner-Jones BE
  7. Brooker J
  8. Connolly JL
  9. Fujimoto JG
  Multiscale nonlinear microscopy and widefield white light imaging enables rapid histological imaging of surgical specimen margins.; Biomedical optics express; Vol 9(5). 2018 May 01.
• 1. Yoshitake T
  2. Giacomelli MG
  3. Quintana LM
  4. Vardeh H
  5. Cahill LC
  6. Faulkner-Jones BE
  7. Connolly JL
  8. Do D
  9. Fujimoto JG
  Rapid histopathological imaging of skin and breast cancer surgical specimens using immersion microscopy with ultraviolet surface excitation.; Scientific reports; Vol 8(1). 2018 Mar 14.
• 1. Cahill LC
  2. Giacomelli MG
  3. Yoshitake T
  4. Vardeh H
  5. Faulkner-Jones BE
  6. Connolly JL
  7. Sun CK
  8. Fujimoto JG
  Rapid virtual hematoxylin and eosin histology of breast tissue specimens using a compact fluorescence nonlinear microscope.; Laboratory investigation; a journal of technical methods and pathology; Vol 98(1). 2018 Jan.
• 1. Lee HC
  2. Ahsen OO
  3. Liang K
  4. Wang Z
  5. Figueiredo M
  6. Giacomelli MG
  7. Potsaid B
  8. Huang Q
  9. Mashimo H
  10. Fujimoto JG
  Endoscopic optical coherence tomography angiography microvascular features associated with dysplasia in Barrett's esophagus (with video).; Gastrointestinal endoscopy; Vol 86(3). 2017 Sep.
• 1. Liang K
  2. Ahsen OO
  3. Wang Z
  4. Lee HC
  5. Liang W
  6. Potsaid BM
  7. Tsai TH
  8. Giacomelli MG
  9. Jayaraman V
  10. Mashimo H
  11. Li X
  12. Fujimoto JG
  Endoscopic forward-viewing optical coherence tomography and angiography with MHz swept source.; Optics letters; Vol 42(16). 2017 Aug 15.
• 1. Yoshitake T
  2. Giacomelli MG
  3. Cahill LC
  4. Schmolze DB
  5. Vardeh H
  6. Faulkner-Jones BE
  7. Connolly JL
  8. Fujimoto JG
  Direct comparison between confocal and multiphoton microscopy for rapid histopathological evaluation of unfixed human breast tissue.; Journal of biomedical optics; Vol 21(12). 2016 Jan 01.
• 1. Giacomelli MG
  2. Husvogt L
  3. Vardeh H
  4. Faulkner-Jones BE
  5. Hornegger J
  6. Connolly JL
  7. Fujimoto JG
  Virtual Hematoxylin and Eosin Transillumination Microscopy Using Epi-Fluorescence Imaging.; PloS one; Vol 11(8). 2016.
• 1. Giacomelli MG
  2. Sheikine Y
  3. Vardeh H
  4. Connolly JL
  5. Fujimoto JG
  Rapid imaging of surgical breast excisions using direct temporal sampling two photon fluorescent lifetime imaging.; Biomedical optics express; Vol 6(11). 2015 Nov 01.
• 1. Tsai TH
  2. Ahsen OO
  3. Lee HC
  4. Liang K
  5. Figueiredo M
  6. Tao YK
  7. Giacomelli MG
  8. Potsaid BM
  9. Jayaraman V
  10. Huang Q
  11. Cable AE
  12. Fujimoto JG
  13. Mashimo H
  Endoscopic optical coherence angiography enables 3-dimensional visualization of subsurface microvasculature.; Gastroenterology; Vol 147(6). 2014 Dec.
• 1. Tsai TH
  2. Lee HC
  3. Ahsen OO
  4. Liang K
  5. Giacomelli MG
  6. Potsaid BM
  7. Tao YK
  8. Jayaraman V
  9. Figueiredo M
  10. Huang Q
  11. Cable AE
  12. Fujimoto J
  13. Mashimo H
  Ultrahigh speed endoscopic optical coherence tomography for gastroenterology.; Biomedical optics express; Vol 5(12). 2014 Dec 01.
• 1. Ahsen OO
  2. Lee HC
  3. Giacomelli MG
  4. Wang Z
  5. Liang K
  6. Tsai TH
  7. Potsaid B
  8. Mashimo H
  9. Fujimoto JG
  Correction of rotational distortion for catheter-based en face OCT and OCT angiography.; Optics letters; Vol 39(20). 2014 Oct 15.
• 1. Matthews TE
  2. Giacomelli MG
  3. Brown WJ
  4. Wax A
  Fourier domain multispectral multiple scattering low coherence interferometry.; Applied optics; Vol 52(34). 2013 Dec 01.
• 1. Giacomelli MG
  2. Wax A
  Imaging beyond the ballistic limit in coherence imaging using multiply scattered light.; Optics express; Vol 19(5). 2011 Feb 28.
• 1. Zhu Y
  2. Giacomelli MG
  3. Wax A
  Fiber-optic interferometric two-dimensional scattering-measurement system.; Optics letters; Vol 35(10). 2010 May 15.
• 1. Chalut KJ
  2. Kulangara K
  3. Giacomelli MG
  4. Wax A
  5. Leong KW
  Deformation of stem cell nuclei by nanotopographical cues.; Soft matter; Vol 6(8). 2010 Apr 21.
• 1. Amoozegar C
  2. Giacomelli MG
  3. Keener JD
  4. Chalut KJ
  5. Wax A
  Experimental verification of T-matrix-based inverse light scattering analysis for assessing structure of spheroids as models of cell nuclei.; Applied optics; Vol 48(10). 2009 Apr 01.
• 1. Chalut KJ
  2. Ostrander JH
  3. Giacomelli MG
  4. Wax A
  Light scattering measurements of subcellular structure provide noninvasive early detection of chemotherapy-induced apoptosis.; Cancer research; Vol 69(3). 2009 Feb 01.
• 1. Giacomelli MG
  2. Chalut KJ
  3. Ostrander JH
  4. Wax A
  Application of the T-matrix method to determine the structure of spheroidal cell nuclei with angle-resolved light scattering.; Optics letters; Vol 33(21). 2008 Nov 01.
• 1. Chalut KJ
  2. Giacomelli MG
  3. Wax A
  Application of Mie theory to assess structure of spheroidal scattering in backscattering geometries.; Journal of the Optical Society of America. A, Optics, image science, and vision; Vol 25(8). 2008 Aug.
• 1. Chalut KJ
  2. Chen S
  3. Finan JD
  4. Giacomelli MG
  5. Guilak F
  6. Leong KW
  7. Wax A
  Label-free, high-throughput measurements of dynamic changes in cell nuclei using angle-resolved low coherence interferometry.; Biophysical journal; Vol 94(12). 2008 Jun.
• 1. Giacomelli MG
  2. Hancock AS
  3. Masel J
  The conversion of 3' UTRs into coding regions.; Molecular biology and evolution; Vol 24(2). 2007 Feb.